| 1 | Cayetano Sarmiento | Lululemon/Bulgaria Blackfish | 4h36'11 |
| 2 | Andres Saldarriaga | Azteca-NBCSN | + 34 |
| 3 | Beñat Intxausti | RBC Pro Cycling | + 54 |
| 4 | Janez Brajkovic | ONCE-Eroski | s.t. |
| 5 | Emanuele Sella | Siam Cement - Lenovo | s.t. |
| 6 | Martijn Keizer | Aegon - Lavazza | s.t. |
| 7 | Florentino Marquez | Bank of Ireland - Irish Cycling | s.t. |
| 8 | Dominique Nerz | Team Puma - SAP | + 1'27 |
| 9 | Natnael Berhane | Eritel - Sonatrach | s.t. |
| 10 | Tiago Machado | Prio - Porto | s.t. |
| 11 | Ryan Eastman | Project: Africa | s.t. |
| 12 | Mwangi Samwel | Team Kenya Airways | s.t. |
| 13 | Artemio Moschella | Mobil - Aeropostal Ciclismo | + 1'49 |
| 14 | Nairo Quintana | Azteca-NBCSN | + 2'03 |
| 15 | Petar Panayotov | Lululemon/Bulgaria Blackfish | s.t. |
| 16 | Nikias Arndt | Team Puma - SAP | s.t. |
| 17 | Magno Nazaret | Buff - Polska | s.t. |
| 18 | Igor Antón | ONCE-Eroski | s.t. |
| 19 | Mirsamad Poorseyedi | Siam Cement - Lenovo | s.t. |
| 20 | Robert Kiserlovski | Siam Cement - Lenovo | s.t. |
| 21 | Yevgeni Nepomnyachsniy | Children of Chernobyl Foundation p/b Nemiroff | s.t. |
| 22 | Jarlinson Pantano Gómez | ONCE-Eroski | s.t. |
| 23 | Silvio Herklotz | Team Puma - SAP | s.t. |
| 24 | Wilmer Vasquez | Azteca-NBCSN | s.t. |
| 25 | Mikayil Krasnoperov | Children of Chernobyl Foundation p/b Nemiroff | s.t. |
| 26 | Eduardo Gonzalo | Buff - Polska | s.t. |
| 27 | Rafael Reis | Prio - Porto | s.t. |
| 28 | Fabio Aru | Aegon - Lavazza | s.t. |
| 29 | Francesco Bongiorno | Team Puma - SAP | s.t. |
| 30 | José Antonio Redondo | Buff - Polska | s.t. |
| 31 | Peter Stetina | Project: Africa | s.t. |
| 32 | Aberlardo Ablenado | ONCE-Eroski | s.t. |
| 33 | Remberto Jaramillo | Mobil - Aeropostal Ciclismo | s.t. |
| 34 | Daan Olivier | Aegon - Lavazza | s.t. |
| 35 | David Arroyo | Euskaltel-Air France | s.t. |
| 36 | Rafael Serrano | Bank of Ireland - Irish Cycling | s.t. |
| 37 | Daniel Teklehaimanot | Eritel - Sonatrach | s.t. |
| 38 | Paúl Torres | Mobil - Aeropostal Ciclismo | s.t. |
| 39 | Mattia Pozzo | Eddie Stobart Procycling | s.t. |
| 40 | John-Lee Augustyn | Project: Africa | s.t. |
| 41 | Bruno Silva | Prio - Porto | s.t. |
| 42 | Rémy Di Gregorio | Eddie Stobart Procycling | s.t. |
| 43 | José Angel Gomez Marchante | Bank of Ireland - Irish Cycling | s.t. |
| 44 | Jacques Janse van Rensburg | Project: Africa | s.t. |
| 45 | Saul Raisin | Mobil - Aeropostal Ciclismo | s.t. |
| 46 | Johannes Heider | Team Puma - SAP | s.t. |
| 47 | Adrien Niyonshuti | Project: Africa | s.t. |
| 48 | Vitor Rodrigues | Siam Cement - Lenovo | s.t. |
| 49 | Clovis Kamzong | Team Kenya Airways | s.t. |
| 50 | Fredy Montaña | Azteca-NBCSN | s.t. |
| 51 | Nelson Oliveira | Prio - Porto | s.t. |
| 52 | Florian Morizot | RBC Pro Cycling | + 3'07 |
| 53 | Juan José Cobo | Euskaltel-Air France | + 3'45 |
| 54 | Connor McConvey | Bank of Ireland - Irish Cycling | s.t. |
| 55 | Julián Becerra | Azteca-NBCSN | s.t. |
| 56 | Serge Pauwels | Aegon - Lavazza | s.t. |
| 57 | Simon Kimeli | Team Kenya Airways | s.t. |
| 58 | Jaroslav Popovych | Children of Chernobyl Foundation p/b Nemiroff | s.t. |
| 59 | Juan Murillo | Azteca-NBCSN | s.t. |
| 60 | Amets Txurruka | Euskaltel-Air France | s.t. |
| 61 | Antonio Pedrero | Buff - Polska | s.t. |
| 62 | Delio Fernandez | Euskaltel-Air France | s.t. |
| 63 | Valerio Agnoli | Eddie Stobart Procycling | s.t. |
| 64 | Mark Galedo | Siam Cement - Lenovo | + 4'33 |
| 65 | Hector Duenas Nevado | Euskaltel-Air France | s.t. |
| 66 | Kai Reus | RBC Pro Cycling | s.t. |
| 67 | Rafael Infantino | Euskaltel-Air France | s.t. |
| 68 | Manuel Lloret | Euskaltel-Air France | + 5'31 |
| 69 | José Serpa | Azteca-NBCSN | + 6'48 |
| 70 | Jimmi Briceno | Azteca-NBCSN | + 7'32 |
| 71 | Brent Bookwalter | Team Kenya Airways | + 9'24 |
| 72 | Erick Rowsell | Eritel - Sonatrach | s.t. |
| 73 | Patrick Bevin | Team Puma - SAP | s.t. |
| 74 | Jetse Bol | Team Puma - SAP | s.t. |
| 75 | David Bartl | Buff - Polska | s.t. |
| 76 | Romain Bardet | Lululemon/Bulgaria Blackfish | s.t. |
| 77 | Merhawi Kudus | Team Kenya Airways | s.t. |
| 78 | Momchil Robov | Lululemon/Bulgaria Blackfish | s.t. |
| 79 | Georgi Petrov Georgiev | Lululemon/Bulgaria Blackfish | s.t. |
| 80 | Shaun Lewis | Eddie Stobart Procycling | s.t. |
| 81 | Richard Antonio Carapaz | ONCE-Eroski | s.t. |
| 82 | Roman Kreuziger | RBC Pro Cycling | s.t. |
| 83 | Gert Rajala | Bank of Ireland - Irish Cycling | s.t. |
| 84 | Reinhardt Janse van Rensburg | Project: Africa | s.t. |
| 85 | Stéphane Rossetto | Team Kenya Airways | s.t. |
| 86 | Christian Meier | RBC Pro Cycling | s.t. |
| 87 | Dmitri Grabovski | RBC Pro Cycling | s.t. |
| 88 | Jay Thomson | Project: Africa | + 10'19 |
| 89 | Tim Declerq | Team Puma - SAP | + 10'37 |
| 90 | Mustafa Sayar | Siam Cement - Lenovo | + 13'18 |
| 91 | Cameron Wurf | Eddie Stobart Procycling | + 16'37 |
| 92 | Eduardo Sepulveda | Mobil - Aeropostal Ciclismo | + 17'19 |
| 93 | Nathan Earle | Eddie Stobart Procycling | s.t. |
| 94 | Jaka Bostner | Buff - Polska | + 17'37 |
| 95 | Frederico Figueiredo | Prio - Porto | + 19'01 |
| 96 | Sven Fritsch | Lululemon/Bulgaria Blackfish | + 20'12 |
| 97 | Krzysztof Marchewka | Buff - Polska | s.t. |
| 98 | Marios Athanasiades | Children of Chernobyl Foundation p/b Nemiroff | s.t. |
| 99 | Amaël Moinard | Euskaltel-Air France | s.t. |
| 100 | Nicolas Winter | Control Team | s.t. |
| 101 | Stef Clement | Aegon - Lavazza | + 20'57 |
| 102 | Ryan Mullen | Bank of Ireland - Irish Cycling | + 21'05 |
| 103 | Vitaliy Buts | Children of Chernobyl Foundation p/b Nemiroff | + 21'54 |
| 104 | Blake Caldwell | Project: Africa | s.t. |
| 105 | Imanol Erviti | ONCE-Eroski | s.t. |
| 106 | Kamil Gradek | Buff - Polska | s.t. |
| 107 | Abdelmalek Madani | Eritel - Sonatrach | s.t. |
| 108 | Richard Cleaver | Eritel - Sonatrach | + 23'11 |
| 109 | Charles Matte | RBC Pro Cycling | s.t. |
| 110 | Rodrigo Nascimento | Prio - Porto | s.t. |
| 111 | Kristof Vandewalle | Aegon - Lavazza | s.t. |
| 112 | Isaac Bolivar | Lululemon/Bulgaria Blackfish | s.t. |
| 113 | Oleksandr Golovash | ONCE-Eroski | s.t. |
| 114 | Mektel Eyob | Eritel - Sonatrach | + 24'05 |
| 115 | Tomas Vaitkus | Children of Chernobyl Foundation p/b Nemiroff | + 24'29 |
| 116 | Valentin Stoenchev | Lululemon/Bulgaria Blackfish | + 24'49 |
| 117 | Lucas Schädlich | Aegon - Lavazza | s.t. |
| 118 | Tom Dumoulin | Aegon - Lavazza | + 25'06 |
| 119 | Domingos Gonçalves | Prio - Porto | + 25'22 |
| 120 | Daniel Allonca | Prio - Porto | s.t. |
| 121 | Mario Gonzalez Salas | ONCE-Eroski | s.t. |
| 122 | Lotto Petrus | Team Kenya Airways | + 27'33 |
| 123 | Stelly Robert | Bank of Ireland - Irish Cycling | s.t. |
| 124 | Masatoshi Oba | Siam Cement - Lenovo | s.t. |
| 125 | Rasmus Quaade | Siam Cement - Lenovo | s.t. |
| 126 | Faycal Hamza | Eritel - Sonatrach | s.t. |
| 127 | Freddy Cruz | Mobil - Aeropostal Ciclismo | s.t. |
| 128 | Rick Flens | RBC Pro Cycling | s.t. |
| 129 | Andriy Orlov | Children of Chernobyl Foundation p/b Nemiroff | + 28'39 |
| 130 | Mark Renshaw | Eddie Stobart Procycling | + 30'43 |
| 131 | Allan Danger | Control Team | s.t. |
| 132 | Maciej Bodnar | Team Kenya Airways | + 32'15 |
| 133 | Metkel Kiflay | Eritel - Sonatrach | + 32'23 |
| 134 | Giorgio Brambilla | Eddie Stobart Procycling | s.t. |
| 135 | Jose Mojica | Mobil - Aeropostal Ciclismo | + 33'58 |
| 136 | Tiziano Dall'Antonia | Mobil - Aeropostal Ciclismo | + 35'45 |
| 137 | Martyn Irvine | Bank of Ireland - Irish Cycling | s.t. |
| 138 | Leris Moukagni | Control Team | s.t. |
| 139 | Mykhaylo Kononenko | Children of Chernobyl Foundation p/b Nemiroff | + 42'13 |